Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_02888 | Not Available | Positive | 2897319 - 2897729 | 15578.5 |
| uncharacterised protein | SAMEA3472056_02889 | Not Available | Positive | 2897731 - 2898069 | 13081.2 |
| uncharacterised protein | SAMEA3472056_02890 | Not Available | Positive | 2898342 - 2898437 | 3615.72 |
| uncharacterised protein | SAMEA3472056_02891 | Not Available | Positive | 2898421 - 2898633 | 8083.91 |
| uncharacterised protein | SAMEA3472056_02892 | Not Available | Positive | 2898630 - 2898992 | 12841.3 |
| Putative major capsid protein | SAMEA3472056_02893 | Not Available | Positive | 2899011 - 2900039 | 37959.9 |
| uncharacterised protein | SAMEA3472056_02894 | Not Available | Positive | 2900127 - 2900330 | 7637.19 |
| Hypothetical protein | SAMEA3472056_02895 | Not Available | Positive | 2900345 - 2902180 | 67168.8 |
| Phi92_gp135 | SAMEA3472056_02896 | Not Available | Positive | 2902214 - 2902927 | 25751.0 |
| Putative integrase | SAMEA3472056_02897 | Not Available | Negative | 2903009 - 2904286 | 48771.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





