Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3472056_02606 | Not Available | Negative | 2670453 - 2672438 | 74696.3 |
| exoribonuclease ii | SAMEA3472056_02607 | Not Available | Negative | 2672674 - 2674608 | 72490.9 |
| oxidoreductase | SAMEA3472056_02608 | Not Available | Negative | 2674676 - 2675803 | 42257.2 |
| enoyl-(acyl carrier protein) reductase | SAMEA3472056_02609 | Not Available | Negative | 2675947 - 2676735 | 27864.6 |
| transcriptional repressor | SAMEA3472056_02610 | Not Available | Positive | 2677213 - 2677779 | 21828.5 |
| acriflavine resistance protein a precursor | SAMEA3472056_02611 | Not Available | Positive | 2677928 - 2679049 | 39728.0 |
| multidrug efflux protein | SAMEA3472056_02612 | Not Available | Positive | 2679049 - 2682156 | 111648.0 |
| outer membrane efflux lipoprotein | SAMEA3472056_02613 | Not Available | Positive | 2682160 - 2683533 | 49326.3 |
| drug transport transmembrane protein | SAMEA3472056_02614 | Not Available | Positive | 2683542 - 2684705 | 41422.1 |
| peptide abc transporter atp-binding protein | SAMEA3472056_02615 | Not Available | Negative | 2684756 - 2685562 | 30571.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





