Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase 1 | SAMEA3472056_02596 | Not Available | Positive | 2661528 - 2664203 | 97708.8 |
| gtp cyclohydrolase ii | SAMEA3472056_02597 | Not Available | Negative | 2664267 - 2664857 | 21837.3 |
| phosphatidylglycerophosphatase b | SAMEA3472056_02598 | Not Available | Positive | 2665027 - 2665791 | 29022.8 |
| inner membrane protein | SAMEA3472056_02599 | Not Available | Positive | 2665940 - 2666248 | 11352.1 |
| tetratricopeptide repeat protein | SAMEA3472056_02600 | Not Available | Positive | 2666255 - 2667424 | 44533.6 |
| orotidine 5'-phosphate decarboxylase | SAMEA3472056_02601 | Not Available | Positive | 2667557 - 2668354 | 28490.4 |
| translation initiation factor sui1 | SAMEA3472056_02602 | Not Available | Positive | 2668354 - 2668680 | 11411.0 |
| osmotically inducible lipoprotein b | SAMEA3472056_02603 | Not Available | Negative | 2668806 - 2669024 | 6948.51 |
| deor-family transcriptional regulator | SAMEA3472056_02604 | Not Available | Negative | 2669293 - 2670042 | 27590.2 |
| uncharacterised protein | SAMEA3472056_02605 | Not Available | Negative | 2670132 - 2670305 | 6441.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





