Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative inner membrane protein | SAMEA3472056_02585 | Not Available | Positive | 2650441 - 2652336 | 71258.1 |
| 23s rrna pseudouridylate synthase b | SAMEA3472056_02586 | Not Available | Positive | 2652549 - 2653424 | 32713.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMEA3472056_02587 | Not Available | Negative | 2653464 - 2654054 | 22014.2 |
| putative short chain dehydrogenase | SAMEA3472056_02588 | Not Available | Negative | 2654051 - 2654809 | 27972.6 |
| protease | SAMEA3472056_02589 | Not Available | Positive | 2655029 - 2656078 | 39384.7 |
| protein | SAMEA3472056_02590 | Not Available | Negative | 2656114 - 2656365 | 9386.17 |
| dna topoisomerase i | SAMEA3472056_02591 | Not Available | Positive | 2656745 - 2659342 | 97342.0 |
| hth-type transcriptional regulator cysb | SAMEA3472056_02592 | Not Available | Positive | 2659552 - 2660526 | 36152.5 |
| small predicted membrane protein | SAMEA3472056_02593 | Not Available | Positive | 2660857 - 2660985 | 4866.05 |
| protein, c-ter fragment, truncated protein | SAMEA3472056_02594 | Not Available | Positive | 2660988 - 2661155 | 6351.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





