Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ycie | SAMEA3472056_02574 | Not Available | Negative | 2640413 - 2640919 | 18997.6 |
| ycif protein | SAMEA3472056_02575 | Not Available | Negative | 2640965 - 2641465 | 18612.2 |
| protein | SAMEA3472056_02576 | Not Available | Negative | 2641551 - 2641730 | 6029.72 |
| tryptophan synthase alpha chain | SAMEA3472056_02577 | Not Available | Negative | 2642111 - 2642917 | 28725.8 |
| tryptophan synthase | SAMEA3472056_02578 | Not Available | Negative | 2642917 - 2644110 | 43028.7 |
| tryptophan biosynthesis protein | SAMEA3472056_02579 | Not Available | Negative | 2644122 - 2645480 | 49240.8 |
| anthranilate synthase component ii | SAMEA3472056_02580 | Not Available | Negative | 2645484 - 2647079 | 56903.4 |
| anthranilate synthase component i | SAMEA3472056_02581 | Not Available | Negative | 2647079 - 2648641 | 57597.9 |
| putative phosphoesterase | SAMEA3472056_02583 | Not Available | Positive | 2648915 - 2649796 | 32604.7 |
| putative rna binding protein | SAMEA3472056_02584 | Not Available | Positive | 2649793 - 2650413 | 23213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





