Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acyl carrier protein | SAMEA3472056_02544 | Not Available | Positive | 2612438 - 2612686 | 9417.69 |
| putative aminotransferase | SAMEA3472056_02545 | Not Available | Positive | 2612686 - 2613858 | 41727.1 |
| putative permease | SAMEA3472056_02546 | Not Available | Negative | 2613893 - 2614972 | 39774.5 |
| putative permease | SAMEA3472056_02547 | Not Available | Negative | 2614969 - 2616039 | 39924.2 |
| transcriptional regulator | SAMEA3472056_02548 | Not Available | Negative | 2616070 - 2616630 | 20686.1 |
| ybl138 | SAMEA3472056_02549 | Not Available | Negative | 2616642 - 2617466 | 31933.6 |
| membrane protein, conserved protein | SAMEA3472056_02550 | Not Available | Negative | 2617466 - 2618815 | 48624.0 |
| atp-binding protein yghr | SAMEA3472056_02551 | Not Available | Negative | 2618861 - 2619619 | 28126.1 |
| nucleoside triphosphate hydrolase domain | SAMEA3472056_02552 | Not Available | Negative | 2619651 - 2620349 | 25732.5 |
| atp-binding protein yght | SAMEA3472056_02553 | Not Available | Positive | 2620538 - 2621230 | 25417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





