Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate permease | SAMEA3472056_02533 | Not Available | Negative | 2598815 - 2600497 | 58923.7 |
| malate synthase g | SAMEA3472056_02535 | Not Available | Negative | 2600852 - 2603023 | 80449.1 |
| protein glcg | SAMEA3472056_02536 | Not Available | Negative | 2603045 - 2603449 | 13737.5 |
| glycolate oxidase iron-sulfur subunit | SAMEA3472056_02537 | Not Available | Negative | 2603454 - 2604677 | 45158.9 |
| glycolate oxidase subunit | SAMEA3472056_02538 | Not Available | Negative | 2604688 - 2605740 | 38321.2 |
| glycolate oxidase subunit | SAMEA3472056_02539 | Not Available | Negative | 2605740 - 2607239 | 53814.9 |
| dna-binding transcriptional regulator glcc | SAMEA3472056_02540 | Not Available | Positive | 2607490 - 2608254 | 28842.9 |
| dna-binding transcriptional regulator | SAMEA3472056_02541 | Not Available | Negative | 2608261 - 2609403 | 43458.8 |
| amp-binding protein | SAMEA3472056_02542 | Not Available | Positive | 2609774 - 2611495 | 63165.6 |
| putative epimerase | SAMEA3472056_02543 | Not Available | Positive | 2611492 - 2612406 | 33498.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





