Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein i | SAMEA3472056_02523 | Not Available | Negative | 2584836 - 2585207 | 13674.4 |
| type ii secretion system protein h | SAMEA3472056_02524 | Not Available | Negative | 2585204 - 2585767 | 21138.7 |
| general secretion pathway protein g precursor (epsg-like) | SAMEA3472056_02525 | Not Available | Negative | 2585771 - 2586226 | 16663.8 |
| type ii secretion system protein f | SAMEA3472056_02526 | Not Available | Negative | 2586243 - 2587466 | 44894.7 |
| type ii secretion system protein e | SAMEA3472056_02527 | Not Available | Negative | 2587466 - 2588959 | 55267.9 |
| type ii secretion system protein d | SAMEA3472056_02528 | Not Available | Negative | 2588959 - 2591019 | 74192.1 |
| type ii secretion protein gspc | SAMEA3472056_02529 | Not Available | Negative | 2591049 - 2591867 | 29989.1 |
| type ii secretion system lipoprotein | SAMEA3472056_02530 | Not Available | Negative | 2592026 - 2592436 | 14668.9 |
| prepilin peptidase a | SAMEA3472056_02531 | Not Available | Negative | 2592502 - 2593311 | 29511.9 |
| inner membrane lipoprotein | SAMEA3472056_02532 | Not Available | Negative | 2593771 - 2598330 | 167369.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





