Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp/gtp binding protein | SAMEA3472056_02512 | Not Available | Positive | 2569497 - 2570813 | 48766.2 |
| putative atp-dependent helicase | SAMEA3472056_02513 | Not Available | Positive | 2570810 - 2571838 | 37780.7 |
| putative atp-dependent helicase | SAMEA3472056_02514 | Not Available | Positive | 2571878 - 2573008 | 42752.4 |
| uncharacterised protein | SAMEA3472056_02515 | Not Available | Positive | 2573020 - 2577735 | 180688.0 |
| uncharacterised protein | SAMEA3472056_02516 | Not Available | Positive | 2577732 - 2579963 | 85214.4 |
| transposase, orf b, is3 family, is407 group | SAMEA3472056_02518 | Not Available | Positive | 2580715 - 2581191 | 18237.4 |
| general secretion pathway protein yghd | SAMEA3472056_02519 | Not Available | Negative | 2581547 - 2582083 | 20386.7 |
| type ii secretion system protein l | SAMEA3472056_02520 | Not Available | Negative | 2582085 - 2583263 | 44375.6 |
| type ii secretion system protein k | SAMEA3472056_02521 | Not Available | Negative | 2583260 - 2584237 | 36588.4 |
| type ii secretion protein gspj | SAMEA3472056_02522 | Not Available | Negative | 2584234 - 2584839 | 22367.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





