Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yacb | SAMEA3472056_02482 | Not Available | Negative | 2541240 - 2541521 | 10880.2 |
| is66 family transposase orfb | SAMEA3472056_02483 | Not Available | Negative | 2541582 - 2541962 | 14527.2 |
| transposase | SAMEA3472056_02484 | Not Available | Positive | 2542200 - 2542565 | 13452.4 |
| is2 element protein | SAMEA3472056_02485 | Not Available | Positive | 2542523 - 2543428 | 34377.9 |
| putative transferase | SAMEA3472056_02486 | Not Available | Negative | 2543871 - 2544323 | 15887.4 |
| malate transporter | SAMEA3472056_02487 | Not Available | Negative | 2544833 - 2545564 | 27703.9 |
| uncharacterised protein | SAMEA3472056_02488 | Not Available | Positive | 2547580 - 2548434 | 33509.0 |
| uncharacterised protein | SAMEA3472056_02489 | Not Available | Negative | 2548431 - 2549393 | 37709.2 |
| putative atp/gtp-binding protein | SAMEA3472056_02490 | Not Available | Positive | 2549499 - 2550383 | 33285.2 |
| uncharacterised protein | SAMEA3472056_02491 | Not Available | Negative | 2550312 - 2550488 | 6693.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





