Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_02472 | Not Available | Negative | 2532403 - 2532816 | 15416.2 |
| uncharacterised protein | SAMEA3472056_02473 | Not Available | Positive | 2533385 - 2533642 | 9959.83 |
| uncharacterised protein | SAMEA3472056_02474 | Not Available | Positive | 2533642 - 2534232 | 21504.9 |
| uncharacterised protein | SAMEA3472056_02475 | Not Available | Negative | 2534250 - 2534597 | 13420.8 |
| colicin-ia immunity protein colicin ia immunity protein | SAMEA3472056_02476 | Not Available | Positive | 2534726 - 2535061 | 13269.4 |
| colicin protein | SAMEA3472056_02477 | Not Available | Negative | 2535083 - 2536963 | 69400.8 |
| yaga | SAMEA3472056_02478 | Not Available | Negative | 2537242 - 2538588 | 51340.8 |
| yafb | SAMEA3472056_02479 | Not Available | Positive | 2538942 - 2539535 | 22279.6 |
| predicted serine acetlyltransferase | SAMEA3472056_02480 | Not Available | Negative | 2539817 - 2540263 | 16499.3 |
| uncharacterised protein | SAMEA3472056_02481 | Not Available | Positive | 2540703 - 2541044 | 13157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





