Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is30 | SAMEA3472056_02462 | Not Available | Negative | 2525428 - 2526234 | 31324.9 |
| is30 transposase | SAMEA3472056_02463 | Not Available | Negative | 2526411 - 2526821 | 14696.7 |
| is911 transposase orfb | SAMEA3472056_02464 | Not Available | Positive | 2527045 - 2527704 | 25220.0 |
| is1 transposase | SAMEA3472056_02465 | Not Available | Positive | 2527733 - 2528008 | 9898.99 |
| is1 transposase | SAMEA3472056_02466 | Not Available | Positive | 2528053 - 2528430 | 14931.2 |
| putative colicin activity protein | SAMEA3472056_02467 | Not Available | Positive | 2528448 - 2529440 | 35559.3 |
| cbi | SAMEA3472056_02468 | Not Available | Negative | 2529458 - 2529985 | 20187.6 |
| colicin m activity protein cma | SAMEA3472056_02469 | Not Available | Positive | 2530228 - 2531043 | 29484.3 |
| cmi | SAMEA3472056_02470 | Not Available | Negative | 2531093 - 2531446 | 13776.5 |
| resolvase | SAMEA3472056_02471 | Not Available | Negative | 2531619 - 2532401 | 29134.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





