Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472056_02869 | Not Available | Positive | 2884898 - 2885716 | 31204.5 |
| Hypothetical protein | SAMEA3472056_02870 | Not Available | Positive | 2885807 - 2886292 | 18263.6 |
| putative dna repair protein | SAMEA3472056_02871 | Not Available | Positive | 2886307 - 2886783 | 17657.3 |
| Hypothetical protein | SAMEA3472056_02872 | Not Available | Positive | 2886852 - 2887073 | 8411.2 |
| Hypothetical protein | SAMEA3472056_02873 | Not Available | Positive | 2887088 - 2887732 | 25128.2 |
| yagb/yeeu/yfjz family protein | SAMEA3472056_02874 | Not Available | Positive | 2887782 - 2888150 | 13825.3 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472056_02875 | Not Available | Positive | 2888239 - 2888616 | 14177.0 |
| aec77 | SAMEA3472056_02876 | Not Available | Positive | 2888613 - 2888783 | 6091.2 |
| aec78 | SAMEA3472056_02877 | Not Available | Positive | 2889121 - 2889318 | 7582.97 |
| Dna restriction methylase | SAMEA3472056_02878 | Not Available | Positive | 2889415 - 2890263 | 32760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





