Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_02378 | Not Available | Negative | 2454810 - 2455202 | 13986.0 |
| dsbc | SAMEA3472056_02379 | Not Available | Negative | 2455227 - 2455976 | 27096.0 |
| putative pilin biogenesis protein | SAMEA3472056_02380 | Not Available | Positive | 2456124 - 2456663 | 20635.6 |
| uncharacterised protein | SAMEA3472056_02381 | Not Available | Positive | 2456794 - 2457312 | 19675.6 |
| uncharacterised protein | SAMEA3472056_02382 | Not Available | Negative | 2457420 - 2458709 | 49470.2 |
| inner membrane protein | SAMEA3472056_02383 | Not Available | Negative | 2458890 - 2462843 | 139755.0 |
| pilus assembly protein | SAMEA3472056_02384 | Not Available | Negative | 2462852 - 2464267 | 50430.4 |
| pilus assembly protein | SAMEA3472056_02385 | Not Available | Negative | 2464257 - 2465303 | 39302.1 |
| plasmid transfer protein | SAMEA3472056_02386 | Not Available | Negative | 2465897 - 2466409 | 19140.0 |
| plasmid transfer protein | SAMEA3472056_02387 | Not Available | Negative | 2466411 - 2467211 | 30313.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





