Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor kinase cuss | SAMEA3472056_02338 | Not Available | Negative | 2418463 - 2419944 | 56129.7 |
| dna-binding transcriptional activator cusr | SAMEA3472056_02339 | Not Available | Negative | 2419937 - 2420617 | 25226.8 |
| copper/silver efflux system outer membrane protein cusc | SAMEA3472056_02340 | Not Available | Positive | 2420807 - 2422192 | 51151.6 |
| copper-binding protein | SAMEA3472056_02341 | Not Available | Positive | 2422221 - 2422574 | 12592.1 |
| copper/silver efflux system membrane fusion protein cusb | SAMEA3472056_02342 | Not Available | Positive | 2422688 - 2423980 | 47773.4 |
| copper/silver efflux system, membrane component | SAMEA3472056_02343 | Not Available | Positive | 2423991 - 2427137 | 114566.0 |
| exported protein | SAMEA3472056_02344 | Not Available | Positive | 2427224 - 2427664 | 15509.0 |
| cation-transporting p-type atpase | SAMEA3472056_02345 | Not Available | Positive | 2427792 - 2430239 | 87118.9 |
| protein of uncharacterised function (duf2933) | SAMEA3472056_02346 | Not Available | Positive | 2430280 - 2430477 | 7261.74 |
| peptidase | SAMEA3472056_02347 | Not Available | Negative | 2430511 - 2431248 | 27025.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





