Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472056_02808 | Not Available | Positive | 2828479 - 2829243 | 27982.3 |
| Putative coat protein | SAMEA3472056_02809 | Not Available | Positive | 2829342 - 2830481 | 39426.8 |
| Hypothetical protein | SAMEA3472056_02810 | Not Available | Positive | 2830524 - 2830700 | 6589.86 |
| Putative head-tail joining protein | SAMEA3472056_02811 | Not Available | Positive | 2830704 - 2831099 | 13989.7 |
| Hypothetical protein | SAMEA3472056_02812 | Not Available | Positive | 2831099 - 2831482 | 14023.5 |
| Tail protein | SAMEA3472056_02813 | Not Available | Positive | 2831483 - 2831863 | 13642.2 |
| Putative tail terminator protein | SAMEA3472056_02814 | Not Available | Positive | 2831860 - 2832252 | 14346.3 |
| Putative major tail protein | SAMEA3472056_02815 | Not Available | Positive | 2832279 - 2833241 | 33677.1 |
| Attr | Not Available | Not Available | Positive | 2833210 - 2833223 | Not Available |
| Attl | Not Available | Not Available | Positive | 2884747 - 2884759 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





