Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parm | SAMEA3472056_02238 | Not Available | Positive | 2324525 - 2325562 | 38540.6 |
| parr | SAMEA3472056_02239 | Not Available | Positive | 2325574 - 2326212 | 23618.1 |
| htda | SAMEA3472056_02240 | Not Available | Positive | 2326617 - 2327069 | 16560.2 |
| htdf | SAMEA3472056_02241 | Not Available | Positive | 2327059 - 2327484 | 15623.9 |
| putative plasmid transfer protein | SAMEA3472056_02242 | Not Available | Positive | 2327466 - 2328047 | 21590.2 |
| protein of uncharacterised function (duf3607) | SAMEA3472056_02243 | Not Available | Positive | 2328167 - 2332471 | 158524.0 |
| trhf | SAMEA3472056_02244 | Not Available | Positive | 2332749 - 2333261 | 19397.9 |
| trhw | SAMEA3472056_02245 | Not Available | Positive | 2333248 - 2334759 | 56458.1 |
| uncharacterised protein | SAMEA3472056_02246 | Not Available | Positive | 2334761 - 2334895 | 5053.18 |
| trhu | SAMEA3472056_02247 | Not Available | Positive | 2334901 - 2335959 | 38908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





