Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysozyme | SAMEA3472056_02798 | Not Available | Positive | 2818895 - 2819392 | 18045.0 |
| Cell lysis protein | SAMEA3472056_02799 | Not Available | Positive | 2819389 - 2819853 | 17286.7 |
| rac prophage | SAMEA3472056_02800 | Not Available | Positive | 2820024 - 2821448 | 52684.3 |
| Putative parb nuclease | SAMEA3472056_02801 | Not Available | Positive | 2821586 - 2822377 | 29765.2 |
| Hypothetical protein | SAMEA3472056_02802 | Not Available | Positive | 2822370 - 2823302 | 35346.0 |
| uncharacterised protein | SAMEA3472056_02803 | Not Available | Positive | 2823280 - 2823489 | 7850.46 |
| Terminase small subunit | SAMEA3472056_02804 | Not Available | Positive | 2823493 - 2824587 | 40999.3 |
| Putative large terminase subunit | SAMEA3472056_02805 | Not Available | Positive | 2824568 - 2825869 | 49056.7 |
| Portal protein | SAMEA3472056_02806 | Not Available | Positive | 2825872 - 2827278 | 53059.7 |
| Head morphogenesis protein | SAMEA3472056_02807 | Not Available | Positive | 2827259 - 2828374 | 41431.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





