Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2629) | SAMEA3472056_02171 | Not Available | Negative | 2253490 - 2253678 | 7032.31 |
| cellulose biosynthesis protease | SAMEA3472056_02172 | Not Available | Positive | 2253962 - 2255521 | 58917.9 |
| membrane protein yhjt | SAMEA3472056_02173 | Not Available | Positive | 2255518 - 2255709 | 7364.39 |
| cellulose biosynthesis endoglucanase | SAMEA3472056_02174 | Not Available | Positive | 2255706 - 2257385 | 62019.3 |
| toxic polypeptide, small | SAMEA3472056_02175 | Not Available | Negative | 2257472 - 2257579 | 3882.93 |
| toxic polypeptide, small | SAMEA3472056_02177 | Not Available | Negative | 2257955 - 2258062 | 3882.93 |
| toxic polypeptide, small | SAMEA3472056_02179 | Not Available | Negative | 2258438 - 2258545 | 3882.93 |
| transport protein yhjv | SAMEA3472056_02181 | Not Available | Positive | 2259021 - 2260292 | 47303.4 |
| dipeptide transporter atp-binding subunit | SAMEA3472056_02182 | Not Available | Negative | 2260322 - 2261326 | 37534.6 |
| dipeptide abc transporter atp-binding protein | SAMEA3472056_02183 | Not Available | Negative | 2261323 - 2262306 | 35846.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





