Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase | SAMEA3472056_02161 | Not Available | Negative | 2235913 - 2236680 | 29602.9 |
| ketodeoxygluconokinase | SAMEA3472056_02162 | Not Available | Positive | 2236912 - 2237841 | 33963.2 |
| putative protease | SAMEA3472056_02163 | Not Available | Negative | 2237937 - 2239433 | 55532.4 |
| c4-dicarboxylate transport protein | SAMEA3472056_02164 | Not Available | Negative | 2239654 - 2240940 | 45439.2 |
| putative diguanylate cyclase | SAMEA3472056_02165 | Not Available | Negative | 2241123 - 2243072 | 72954.9 |
| cellulose synthase subunit bcsc | SAMEA3472056_02166 | Not Available | Negative | 2243193 - 2246666 | 127814.0 |
| endo-1,4-d-glucanase | SAMEA3472056_02167 | Not Available | Negative | 2246648 - 2247754 | 41792.5 |
| cellulose synthase regulator protein | SAMEA3472056_02168 | Not Available | Negative | 2247761 - 2250064 | 84679.8 |
| cellulose synthase catalytic subunit | SAMEA3472056_02169 | Not Available | Negative | 2250111 - 2252729 | 99790.3 |
| cell division protein | SAMEA3472056_02170 | Not Available | Negative | 2252726 - 2253478 | 27895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





