Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | SAMEA3472056_02150 | Not Available | Negative | 2221400 - 2222128 | 28030.0 |
| arac family transcriptional regulator | SAMEA3472056_02152 | Not Available | Negative | 2222496 - 2223320 | 31374.2 |
| glutamate decarboxylase beta | SAMEA3472056_02153 | Not Available | Negative | 2223691 - 2225091 | 52702.0 |
| putative cytochrome c peroxidase | SAMEA3472056_02154 | Not Available | Negative | 2225302 - 2226699 | 51559.3 |
| cytoplasmic trehalase | SAMEA3472056_02155 | Not Available | Positive | 2227103 - 2228752 | 63700.1 |
| transcriptional regulator | SAMEA3472056_02156 | Not Available | Negative | 2228803 - 2229405 | 22605.6 |
| lysr family transcriptional regulator | SAMEA3472056_02157 | Not Available | Positive | 2229853 - 2230824 | 36066.0 |
| pp_02064 | SAMEA3472056_02158 | Not Available | Positive | 2230873 - 2231886 | Not Available |
| major facilitator superfamily protein | SAMEA3472056_02159 | Not Available | Positive | 2232279 - 2233601 | 47210.9 |
| putative outer membrane assembly protein | SAMEA3472056_02160 | Not Available | Negative | 2233783 - 2235843 | 74487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





