Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate abc transporter, substrate-binding protein | SAMEA3472056_02050 | Not Available | Negative | 2122798 - 2124114 | 48467.2 |
| uncharacterized protein conserved in bacteria containing a divergent form of tpr repeats | SAMEA3472056_02051 | Not Available | Negative | 2124474 - 2125220 | 28876.8 |
| leucine/isoleucine/valine transporter atp-binding subunit | SAMEA3472056_02052 | Not Available | Negative | 2125339 - 2126052 | 26297.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein | SAMEA3472056_02053 | Not Available | Negative | 2126054 - 2126821 | 28428.7 |
| high-affinity branched-chain amino acid abc transporter permease | SAMEA3472056_02054 | Not Available | Negative | 2126818 - 2128095 | 46278.1 |
| high-affinity branched-chain amino acid abc transporter permease | SAMEA3472056_02055 | Not Available | Negative | 2128092 - 2129018 | 32984.4 |
| leucine-specific transport system | SAMEA3472056_02056 | Not Available | Negative | 2129066 - 2130175 | 39362.9 |
| putative acetyltransferase | SAMEA3472056_02057 | Not Available | Positive | 2130599 - 2130982 | 14559.4 |
| n-acetyltransferase gcn5 | SAMEA3472056_02058 | Not Available | Negative | 2130979 - 2131506 | 19674.7 |
| toxin-antitoxin system protein | SAMEA3472056_02059 | Not Available | Negative | 2131513 - 2131779 | 9938.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





