Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein rtcb | SAMEA3472056_02019 | Not Available | Negative | 2085769 - 2086995 | 45241.5 |
| transcriptional regulator | SAMEA3472056_02020 | Not Available | Positive | 2087182 - 2088780 | 60280.6 |
| dna-binding transcriptional repressor glpr | SAMEA3472056_02021 | Not Available | Negative | 2088762 - 2089520 | 28049.6 |
| rhomboid intramembrane serine protease | SAMEA3472056_02022 | Not Available | Negative | 2089537 - 2090367 | 31308.5 |
| thiosulfate sulfurtransferase | SAMEA3472056_02023 | Not Available | Negative | 2090412 - 2090738 | 12083.1 |
| aerobic glycerol-3-phosphate dehydrogenase | SAMEA3472056_02024 | Not Available | Positive | 2090928 - 2092433 | 56666.6 |
| ybl142 | SAMEA3472056_02025 | Not Available | Negative | 2092647 - 2093249 | 23568.8 |
| ybl143 | SAMEA3472056_02026 | Not Available | Negative | 2093249 - 2094241 | 37123.0 |
| phosphate transport system substrate-binding protein | SAMEA3472056_02027 | Not Available | Negative | 2094267 - 2095775 | 56651.0 |
| glycogen phosphorylase | SAMEA3472056_02028 | Not Available | Negative | 2095901 - 2098348 | 93177.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





