Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine synthesizing protein c | SAMEA3472056_01949 | Not Available | Negative | 2010845 - 2011204 | 13015.8 |
| trna 2-thiouridine synthesizin protein d (sulfurtransferase) | SAMEA3472056_01950 | Not Available | Negative | 2011204 - 2011590 | 13610.1 |
| putative dna-binding transcriptional regulator | SAMEA3472056_01951 | Not Available | Negative | 2011590 - 2012312 | 26836.2 |
| fkbp-type peptidyl-prolyl isomerase | SAMEA3472056_01952 | Not Available | Negative | 2012479 - 2013291 | 28943.4 |
| protein slyx | SAMEA3472056_01953 | Not Available | Positive | 2013512 - 2013730 | 8214.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMEA3472056_01954 | Not Available | Negative | 2013779 - 2014369 | 20854.1 |
| protein | SAMEA3472056_01955 | Not Available | Negative | 2014464 - 2014664 | 7599.17 |
| glutathione-regulated potassium-efflux system protein (k(+)/h(+)antiporter) | SAMEA3472056_01956 | Not Available | Negative | 2014674 - 2016479 | 66401.3 |
| glutathione-regulated potassium-efflux system ancillary protein | SAMEA3472056_01957 | Not Available | Negative | 2016479 - 2017030 | 20827.9 |
| abc transporter atp-binding protein | SAMEA3472056_01958 | Not Available | Positive | 2017161 - 2019074 | 71847.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





