Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase 1 subunit delta | SAMEA3472056_01918 | Not Available | Positive | 1981844 - 1982554 | 26468.4 |
| respiratory nitrate reductase 1 subunit gamma | SAMEA3472056_01919 | Not Available | Positive | 1982554 - 1983231 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 1983594 - 1983678 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1983713 - 1983797 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1983833 - 1983917 | Not Available |
| formyltetrahydrofolate deformylase | SAMEA3472056_01924 | Not Available | Negative | 1984077 - 1984919 | 31938.6 |
| sec-c motif domain-containing protein | SAMEA3472056_01925 | Not Available | Negative | 1984969 - 1985427 | 16973.2 |
| patatin | SAMEA3472056_01926 | Not Available | Positive | 1985501 - 1986445 | 34329.6 |
| orphan two-component response regulator | SAMEA3472056_01927 | Not Available | Positive | 1986537 - 1987550 | 37295.5 |
| utp--glucose-1-phosphate uridylyltransferase | SAMEA3472056_01928 | Not Available | Positive | 1987752 - 1988660 | 32944.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





