Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein lolb | SAMEA3472056_01896 | Not Available | Negative | 1960237 - 1960860 | 23564.1 |
| glutamyl-trna reductase | SAMEA3472056_01897 | Not Available | Positive | 1961005 - 1962330 | 48922.8 |
| peptide chain release factor 1 | SAMEA3472056_01898 | Not Available | Positive | 1962372 - 1963454 | 40519.6 |
| protein methyltransferase hemk (protein-glutamine n methyltransferase) | SAMEA3472056_01899 | Not Available | Positive | 1963454 - 1964287 | 30976.8 |
| transcriptional regulator | SAMEA3472056_01900 | Not Available | Positive | 1964284 - 1964676 | 14625.7 |
| protein sirb1 | SAMEA3472056_01901 | Not Available | Positive | 1964680 - 1965489 | 30843.1 |
| 3-deoxy-7-phosphoheptulonate synthase | SAMEA3472056_01902 | Not Available | Positive | 1965525 - 1966379 | 30834.5 |
| small toxic polypeptide | SAMEA3472056_01903 | Not Available | Negative | 1966527 - 1966634 | 3984.01 |
| small toxic polypeptide | SAMEA3472056_01905 | Not Available | Negative | 1967063 - 1967170 | 4029.99 |
| calcium/sodium:proton antiporter | SAMEA3472056_01907 | Not Available | Negative | 1967575 - 1968675 | 39179.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





