Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface antigen domain protein | SAMEA3472056_01815 | Not Available | Positive | 1873284 - 1873823 | 18921.6 |
| tetr family transcriptional regulator | SAMEA3472056_01816 | Not Available | Negative | 1873885 - 1874580 | 25765.7 |
| protein involved in stress resistance and biofilm formation | SAMEA3472056_01817 | Not Available | Positive | 1874758 - 1875015 | 8815.55 |
| putative peptidoglycan-binding protein | SAMEA3472056_01818 | Not Available | Negative | 1875098 - 1876057 | 34489.7 |
| transcription-repair coupling factor | SAMEA3472056_01819 | Not Available | Negative | 1876202 - 1879696 | 131832.0 |
| putative acyltransferase | SAMEA3472056_01820 | Not Available | Negative | 1879776 - 1880849 | 40868.0 |
| outer membrane-specific lipoprotein transporter subunit lolc | SAMEA3472056_01821 | Not Available | Positive | 1881111 - 1882310 | 43266.5 |
| lipoprotein transporter atp-binding subunit | SAMEA3472056_01822 | Not Available | Positive | 1882303 - 1883004 | 25439.9 |
| lipoprotein-releasing system transmembrane protein | SAMEA3472056_01823 | Not Available | Positive | 1883010 - 1884248 | 45109.7 |
| n-acetyl-d-glucosamine kinase | SAMEA3472056_01824 | Not Available | Positive | 1884277 - 1885188 | 33044.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





