Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3472056_01773 | Not Available | Positive | 1832474 - 1833397 | 33702.4 |
| integral membrane protein mvin | SAMEA3472056_01774 | Not Available | Positive | 1833507 - 1835042 | 55270.8 |
| flagella synthesis protein flgn | SAMEA3472056_01775 | Not Available | Negative | 1835082 - 1835498 | 15867.9 |
| negative regulator of flagellin synthesis (anti-sigma factor) | SAMEA3472056_01776 | Not Available | Negative | 1835503 - 1835796 | 10341.1 |
| flagella basal body p-ring formation protein flga | SAMEA3472056_01777 | Not Available | Negative | 1835872 - 1836531 | 23522.5 |
| flagellar basal-body rod protein flgb | SAMEA3472056_01778 | Not Available | Positive | 1836686 - 1837102 | 15241.1 |
| flagellar basal-body rod protein flgc | SAMEA3472056_01779 | Not Available | Positive | 1837106 - 1837510 | 13968.8 |
| basal-body rod modification protein flgd | SAMEA3472056_01780 | Not Available | Positive | 1837522 - 1838217 | 23576.4 |
| flagellar hook protein flge | SAMEA3472056_01781 | Not Available | Positive | 1838242 - 1839450 | 42046.5 |
| flagellar basal-body rod protein flgf | SAMEA3472056_01782 | Not Available | Positive | 1839470 - 1840225 | 25968.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





