Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small protein involved in biofilm formation and acid stress response | SAMEA3472056_01763 | Not Available | Negative | 1824972 - 1825085 | 4719.1 |
| n-methyl-l-tryptophan oxidase | SAMEA3472056_01764 | Not Available | Negative | 1825133 - 1826251 | 40874.1 |
| biofilm formation regulatory protein bsss | SAMEA3472056_01765 | Not Available | Negative | 1826366 - 1826620 | 9633.29 |
| damage-inducible protein | SAMEA3472056_01766 | Not Available | Negative | 1826910 - 1827155 | 8949.43 |
| dihydroorotase | SAMEA3472056_01767 | Not Available | Negative | 1827229 - 1828275 | 38829.6 |
| putative lipoprotein | SAMEA3472056_01768 | Not Available | Negative | 1828381 - 1828941 | 20501.0 |
| glutaredoxin | SAMEA3472056_01769 | Not Available | Negative | 1829075 - 1829722 | 24351.6 |
| multidrug resistance protein mdth | SAMEA3472056_01770 | Not Available | Negative | 1829786 - 1830994 | 44366.0 |
| ribosomal-protein-alanine acetyltransferase | SAMEA3472056_01771 | Not Available | Positive | 1831230 - 1831814 | 22689.1 |
| conserved protein, upf0502 family | SAMEA3472056_01772 | Not Available | Positive | 1831825 - 1832472 | 24151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





