Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter permease | SAMEA3472056_01733 | Not Available | Positive | 1797605 - 1798915 | 48030.1 |
| uncharacterised protein | SAMEA3472056_01734 | Not Available | Positive | 1798924 - 1799712 | 30644.7 |
| uncharacterised protein | SAMEA3472056_01735 | Not Available | Positive | 1799709 - 1801097 | 51317.5 |
| malonyl coa-acyl carrier protein transacylase | SAMEA3472056_01736 | Not Available | Positive | 1801111 - 1802052 | 34273.4 |
| inner membrane protein | SAMEA3472056_01737 | Not Available | Positive | 1802049 - 1803035 | 38740.7 |
| Trna-ser | Not Available | Not Available | Positive | 1803228 - 1803315 | Not Available |
| dehydrogenase | SAMEA3472056_01739 | Not Available | Positive | 1803549 - 1804487 | 35345.4 |
| putative phosphoesterase | SAMEA3472056_01740 | Not Available | Positive | 1804542 - 1805279 | 26833.9 |
| putative chaperone | SAMEA3472056_01741 | Not Available | Positive | 1805303 - 1805857 | 20782.4 |
| inner membrane protein ycdz | SAMEA3472056_01742 | Not Available | Positive | 1805929 - 1806450 | 18111.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





