Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | SAMEA3472056_01723 | Not Available | Positive | 1787756 - 1788205 | 15770.0 |
| protein of uncharacterised function (duf2686) | SAMEA3472056_01724 | Not Available | Negative | 1788276 - 1788833 | 20634.2 |
| is1 protein insb | SAMEA3472056_01725 | Not Available | Positive | 1789485 - 1789778 | 11467.1 |
| beta-galactosidase | SAMEA3472056_01726 | Not Available | Negative | 1789713 - 1790225 | 19385.3 |
| aminomethyltransferase | SAMEA3472056_01727 | Not Available | Positive | 1790276 - 1791436 | 43444.6 |
| beta-ketoacyl synthase domain-containing protein | SAMEA3472056_01728 | Not Available | Positive | 1791510 - 1794068 | 92034.2 |
| beta-ketoacyl synthase domain-containing protein | SAMEA3472056_01729 | Not Available | Positive | 1794073 - 1795296 | 44157.5 |
| uncharacterised protein | SAMEA3472056_01730 | Not Available | Positive | 1795293 - 1796246 | 36312.4 |
| lipoprotein-releasing system atp-binding protein lold | SAMEA3472056_01731 | Not Available | Positive | 1796257 - 1796964 | 25340.7 |
| uncharacterised protein | SAMEA3472056_01732 | Not Available | Positive | 1796948 - 1797604 | 24430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





