Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system ascorbate-specific transporter subunit iic | SAMEA3472056_01713 | Not Available | Positive | 1781629 - 1783026 | 50746.6 |
| pts system l-ascorbate-specific transporter subunit iib | SAMEA3472056_01714 | Not Available | Positive | 1783042 - 1783347 | 10896.3 |
| ascorbate-specific pts system eiia component | SAMEA3472056_01715 | Not Available | Positive | 1783357 - 1783821 | 17224.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3472056_01716 | Not Available | Positive | 1783835 - 1784485 | 23650.4 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3472056_01717 | Not Available | Positive | 1784495 - 1785349 | 32068.5 |
| l-ribulose-5-phosphate 4-epimerase ulaf | SAMEA3472056_01718 | Not Available | Positive | 1785349 - 1786035 | 25325.2 |
| protein | SAMEA3472056_01719 | Not Available | Negative | 1786164 - 1786439 | 10149.9 |
| 30s ribosomal protein s6 | SAMEA3472056_01720 | Not Available | Positive | 1786766 - 1787161 | 15187.9 |
| primosomal replication protein n | SAMEA3472056_01721 | Not Available | Positive | 1787168 - 1787482 | 11472.9 |
| 30s ribosomal protein s18 | SAMEA3472056_01722 | Not Available | Positive | 1787487 - 1787714 | 8986.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





