Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, duf2491 family | SAMEA3472056_01703 | Not Available | Positive | 1772951 - 1773610 | 25040.4 |
| membrane protein yjfl | SAMEA3472056_01704 | Not Available | Positive | 1773628 - 1774026 | 14224.7 |
| putative membrane protein yjfm | SAMEA3472056_01705 | Not Available | Positive | 1774036 - 1774674 | 23541.1 |
| glutathionylspermidine synthase yjfc | SAMEA3472056_01706 | Not Available | Positive | 1774677 - 1775840 | 45050.0 |
| isovaleryl coa dehydrogenase | SAMEA3472056_01707 | Not Available | Positive | 1775924 - 1777549 | 60622.5 |
| protein | SAMEA3472056_01708 | Not Available | Negative | 1777666 - 1777941 | 9949.64 |
| putative lipoprotein | SAMEA3472056_01709 | Not Available | Negative | 1778090 - 1778419 | 12066.7 |
| putative esterase | SAMEA3472056_01710 | Not Available | Positive | 1778601 - 1779350 | 27559.9 |
| deor-family transcriptional regulator | SAMEA3472056_01711 | Not Available | Negative | 1779347 - 1780102 | 27603.6 |
| l-ascorbate 6-phosphate lactonase | SAMEA3472056_01712 | Not Available | Negative | 1780210 - 1781274 | 40062.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





