Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin cpn60 | SAMEA3472056_01662 | Not Available | Positive | 1733277 - 1734923 | 57332.4 |
| putative lipoprotein | SAMEA3472056_01663 | Not Available | Positive | 1735061 - 1735414 | 11959.2 |
| protein | SAMEA3472056_01664 | Not Available | Negative | 1735607 - 1736476 | 33012.0 |
| radical sam superfamily protein | SAMEA3472056_01665 | Not Available | Negative | 1736826 - 1737854 | 38728.8 |
| elongation factor p (ef-p) | SAMEA3472056_01666 | Not Available | Positive | 1737896 - 1738462 | 20592.4 |
| entericidin a | SAMEA3472056_01667 | Not Available | Positive | 1738514 - 1738639 | 4359.48 |
| entericidin b | SAMEA3472056_01668 | Not Available | Positive | 1738750 - 1738896 | 4809.81 |
| quaternary ammonium compound-resistance protein | SAMEA3472056_01670 | Not Available | Positive | 1739077 - 1739394 | 10901.0 |
| outer membrane lipoprotein | SAMEA3472056_01671 | Not Available | Negative | 1739391 - 1739924 | 19924.7 |
| beta-lactamase | SAMEA3472056_01672 | Not Available | Negative | 1740013 - 1741146 | 41564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





