Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component response regulator | SAMEA3472056_01642 | Not Available | Negative | 1711566 - 1712285 | 27489.9 |
| two-component sensor kinase | SAMEA3472056_01643 | Not Available | Negative | 1712282 - 1713913 | 60568.4 |
| uncharacterized conserved protein | SAMEA3472056_01644 | Not Available | Positive | 1714094 - 1714324 | 8550.35 |
| acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3472056_01645 | Not Available | Positive | 1714336 - 1714608 | 10495.6 |
| protein | SAMEA3472056_01646 | Not Available | Positive | 1714835 - 1715131 | 11468.6 |
| putative inner membrane protein | SAMEA3472056_01647 | Not Available | Positive | 1715159 - 1715332 | 6555.44 |
| lysyl-trna synthetase | SAMEA3472056_01648 | Not Available | Negative | 1715451 - 1716968 | 57843.9 |
| putative oligopeptide transporter | SAMEA3472056_01649 | Not Available | Negative | 1717205 - 1718662 | 53040.7 |
| lysine decarboxylase 1 | SAMEA3472056_01650 | Not Available | Negative | 1718721 - 1720868 | 81264.7 |
| cadaverine/lysine antiporter | SAMEA3472056_01651 | Not Available | Negative | 1720948 - 1722282 | 46658.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





