Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein | SAMEA3472056_01632 | Not Available | Negative | 1696197 - 1697840 | 61686.6 |
| arginine/agmatine antiporter | SAMEA3472056_01633 | Not Available | Negative | 1697944 - 1699281 | 46845.3 |
| arac family transcriptional regulator | SAMEA3472056_01634 | Not Available | Negative | 1699418 - 1700179 | 29022.4 |
| biodegradative arginine decarboxylase | SAMEA3472056_01635 | Not Available | Negative | 1700504 - 1702774 | 84557.0 |
| melibiose operon regulatory protein | SAMEA3472056_01636 | Not Available | Negative | 1702970 - 1703878 | 34929.9 |
| alpha-galactosidase | SAMEA3472056_01637 | Not Available | Positive | 1704161 - 1705516 | 50630.8 |
| melibiose:sodium symporter | SAMEA3472056_01638 | Not Available | Positive | 1705631 - 1707040 | 52208.9 |
| putative inner membrane protein | SAMEA3472056_01639 | Not Available | Negative | 1707179 - 1707808 | 23372.4 |
| tartrate/fumarate subfamily fe-s type hydro-lyase subunit beta | SAMEA3472056_01640 | Not Available | Negative | 1707931 - 1709577 | 60078.7 |
| anaerobic c4-dicarboxylate transporter dcub | SAMEA3472056_01641 | Not Available | Negative | 1709655 - 1710995 | 47938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





