Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472056_00338 | Not Available | Positive | 350056 - 350331 | 10196.1 |
| Replication protein | SAMEA3472056_00339 | Not Available | Positive | 350321 - 352588 | 85849.2 |
| uncharacterised protein | SAMEA3472056_00340 | Not Available | Positive | 352672 - 353994 | 49490.8 |
| Putative portal protein | SAMEA3472056_00341 | Not Available | Negative | 354325 - 355899 | 59604.1 |
| Gpp | SAMEA3472056_00342 | Not Available | Negative | 355899 - 356861 | 35597.0 |
| Portal vertex protein | SAMEA3472056_00343 | Not Available | Negative | 356972 - 357421 | 16011.3 |
| Terminase atpase subunit | SAMEA3472056_00344 | Not Available | Negative | 357421 - 359193 | 66574.1 |
| Capsid-scaffolding protein | SAMEA3472056_00345 | Not Available | Positive | 359367 - 360221 | 31463.2 |
| Capsid protein | SAMEA3472056_00346 | Not Available | Positive | 360280 - 361353 | 40227.8 |
| Hypothetical protein | SAMEA3472056_00347 | Not Available | Positive | 361357 - 362100 | 27509.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





