Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative diguanylate phosphodiesterase | SAMEA3472056_01527 | Not Available | Positive | 1588558 - 1589271 | 27073.8 |
| putative cytoplasmic protein ydiu | SAMEA3472056_01528 | Not Available | Positive | 1589334 - 1590770 | 54359.1 |
| putative cytoplasmic protein | SAMEA3472056_01529 | Not Available | Negative | 1590774 - 1590965 | 7117.58 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3472056_01530 | Not Available | Negative | 1591097 - 1592143 | 38737.3 |
| pep synthetase regulatory protein | SAMEA3472056_01531 | Not Available | Negative | 1592300 - 1593133 | 31212.7 |
| phosphoenolpyruvate synthase | SAMEA3472056_01532 | Not Available | Positive | 1593466 - 1595844 | 87440.1 |
| short-chain-fatty-acid--coa ligase (acyl-coa synthetase) | SAMEA3472056_01533 | Not Available | Negative | 1595901 - 1597547 | 60750.6 |
| putative ferrodoxin | SAMEA3472056_01534 | Not Available | Negative | 1597604 - 1597897 | 10685.7 |
| putative flavoprotein | SAMEA3472056_01535 | Not Available | Negative | 1597894 - 1599183 | 45892.7 |
| putative electron transfer flavoprotein subunit alpha | SAMEA3472056_01536 | Not Available | Negative | 1599239 - 1600177 | 33819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





