Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine trna synthetase | SAMEA3472056_01515 | Not Available | Positive | 1578009 - 1579937 | 74018.4 |
| translation initiation factor if-3 | SAMEA3472056_01516 | Not Available | Positive | 1580049 - 1580483 | 16638.4 |
| 50s ribosomal subunit protein l35 | SAMEA3472056_01517 | Not Available | Positive | 1580580 - 1580777 | 7289.38 |
| 50s ribosomal protein l20 | SAMEA3472056_01518 | Not Available | Positive | 1580830 - 1581186 | 13497.7 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3472056_01520 | Not Available | Positive | 1581636 - 1582619 | 36803.9 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3472056_01521 | Not Available | Positive | 1582634 - 1585021 | 87437.2 |
| vitamin b12 abc transporter, permease protein | SAMEA3472056_01523 | Not Available | Positive | 1585426 - 1586406 | 34937.5 |
| vitamin b12 transport periplasmic protein (putative glutathione peroxidase) | SAMEA3472056_01524 | Not Available | Positive | 1586469 - 1587020 | 20395.5 |
| vitamin b12 abc transporter, atp-binding protein | SAMEA3472056_01525 | Not Available | Positive | 1587020 - 1587769 | 27127.9 |
| putative lipoprotein | SAMEA3472056_01526 | Not Available | Positive | 1587847 - 1588311 | 17318.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





