Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flhe | SAMEA3472056_01351 | Not Available | Positive | 1417584 - 1417979 | 14193.5 |
| protein | SAMEA3472056_01352 | Not Available | Negative | 1418100 - 1418588 | 18872.1 |
| arginyl-trna synthetase | SAMEA3472056_01353 | Not Available | Negative | 1418765 - 1420498 | 64686.7 |
| protein yecm | SAMEA3472056_01354 | Not Available | Positive | 1420714 - 1421280 | 21195.1 |
| copper homeostasis protein | SAMEA3472056_01355 | Not Available | Positive | 1421294 - 1422040 | 26660.2 |
| cytochrome c-type protein | SAMEA3472056_01356 | Not Available | Positive | 1422428 - 1423528 | 40268.5 |
| trimethylamine-n-oxide reductase 2 | SAMEA3472056_01357 | Not Available | Positive | 1423553 - 1425982 | 88951.9 |
| putative methyltransferase | SAMEA3472056_01358 | Not Available | Negative | 1426147 - 1427118 | 36998.6 |
| protein yeco | SAMEA3472056_01359 | Not Available | Negative | 1427115 - 1427858 | 27792.3 |
| inner membrane protein | SAMEA3472056_01360 | Not Available | Negative | 1427899 - 1428294 | 15227.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





