Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flil | SAMEA3472056_01290 | Not Available | Negative | 1361081 - 1361545 | 17221.8 |
| flagellar hook-length control protein | SAMEA3472056_01291 | Not Available | Negative | 1361650 - 1362777 | 39358.9 |
| flagellar protein flij | SAMEA3472056_01292 | Not Available | Negative | 1362774 - 1363217 | 17325.6 |
| flagellum-specific atp synthase | SAMEA3472056_01293 | Not Available | Negative | 1363236 - 1364609 | 49318.6 |
| flagellar assembly protein h | SAMEA3472056_01294 | Not Available | Negative | 1364609 - 1365295 | 25039.7 |
| flagellar motor switch protein flig | SAMEA3472056_01295 | Not Available | Negative | 1365288 - 1366283 | 36778.2 |
| flagellar m-ring protein | SAMEA3472056_01296 | Not Available | Negative | 1366276 - 1367934 | 60597.7 |
| flagellar hook-basal body complex protein flie | SAMEA3472056_01297 | Not Available | Positive | 1368149 - 1368463 | 11113.4 |
| non-lee-encoded type iii effector | SAMEA3472056_01298 | Not Available | Positive | 1368813 - 1369952 | 43141.8 |
| gcn5-related n-acetyltransferase | SAMEA3472056_01299 | Not Available | Negative | 1370090 - 1370569 | 17936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





