Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uxu operon transcriptional regulator | SAMEA3472056_01228 | Not Available | Negative | 1299089 - 1299862 | 29291.8 |
| d-mannonate oxidoreductase, nad-binding | SAMEA3472056_01229 | Not Available | Negative | 1300077 - 1301537 | 53659.3 |
| mannonate dehydratase | SAMEA3472056_01230 | Not Available | Negative | 1301618 - 1302802 | 44840.5 |
| high-affinity gluconate transporter | SAMEA3472056_01231 | Not Available | Positive | 1303142 - 1304485 | 47141.0 |
| fimh protein | SAMEA3472056_01232 | Not Available | Negative | 1304728 - 1305630 | 31475.2 |
| p pilus assembly protein, pilin fima | SAMEA3472056_01233 | Not Available | Negative | 1305650 - 1306153 | 17318.3 |
| fimf protein | SAMEA3472056_01234 | Not Available | Negative | 1306166 - 1306696 | 18716.3 |
| outer membrane usher protein fimd | SAMEA3472056_01235 | Not Available | Negative | 1306706 - 1309342 | 96483.8 |
| type i fimbrial chaperone | SAMEA3472056_01236 | Not Available | Negative | 1309409 - 1310134 | 26660.5 |
| type-1 fimbrial protein fimi | SAMEA3472056_01237 | Not Available | Negative | 1310171 - 1310668 | 17706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





