Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | SAMEA3472056_01147 | Not Available | Negative | 1211777 - 1212463 | 25274.5 |
| aerobic respiration control protein arca | SAMEA3472056_01148 | Not Available | Positive | 1213099 - 1213815 | 27293.6 |
| inner membrane protein | SAMEA3472056_01149 | Not Available | Negative | 1213875 - 1215227 | 49939.8 |
| two-component system sensor kinase | SAMEA3472056_01150 | Not Available | Negative | 1215285 - 1216709 | 52218.3 |
| two-component response regulator | SAMEA3472056_01151 | Not Available | Negative | 1216709 - 1217398 | 26142.7 |
| crea protein | SAMEA3472056_01152 | Not Available | Negative | 1217411 - 1217884 | 17108.8 |
| right origin-binding protein | SAMEA3472056_01153 | Not Available | Positive | 1218095 - 1218964 | 33146.8 |
| phosphoglycerate mutase | SAMEA3472056_01154 | Not Available | Negative | 1218961 - 1219608 | 24066.7 |
| ntpase | SAMEA3472056_01155 | Not Available | Positive | 1219660 - 1220172 | 18257.7 |
| trp operon repressor | SAMEA3472056_01156 | Not Available | Negative | 1220319 - 1220615 | 11329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





