Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type iii effector protein | SAMEA3472056_01124 | Not Available | Positive | 1187021 - 1188442 | 55735.8 |
| fimbrial protein | SAMEA3472056_01125 | Not Available | Positive | 1188744 - 1189277 | 19128.5 |
| putative membrane-associated pilin chaperone | SAMEA3472056_01126 | Not Available | Positive | 1189327 - 1190010 | 25390.0 |
| fimbrial outer membrane usher protein | SAMEA3472056_01127 | Not Available | Positive | 1190023 - 1192473 | 92126.7 |
| ybl1 | SAMEA3472056_01128 | Not Available | Positive | 1192486 - 1193445 | 35868.3 |
| transcriptional activator nhar | SAMEA3472056_01129 | Not Available | Negative | 1193483 - 1194382 | 34068.1 |
| na(+)/h(+) antiporter 1 | SAMEA3472056_01130 | Not Available | Negative | 1194448 - 1195614 | 41376.3 |
| chaperone protein dnaj | SAMEA3472056_01132 | Not Available | Negative | 1196456 - 1197586 | 41046.7 |
| chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70) | SAMEA3472056_01134 | Not Available | Negative | 1197675 - 1199591 | 69118.9 |
| protein | SAMEA3472056_01135 | Not Available | Positive | 1199968 - 1200372 | 14509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





