Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | SAMEA3472056_01114 | Not Available | Negative | 1173351 - 1176572 | 117863.0 |
| carbamoyl phosphate synthase small subunit | SAMEA3472056_01115 | Not Available | Negative | 1176590 - 1177765 | 42411.5 |
| dihydrodipicolinate reductase | SAMEA3472056_01116 | Not Available | Negative | 1178194 - 1179015 | 28772.4 |
| nonspecific ribonucleoside hydrolase (purine/pyrimidine ribonucleoside hydrolase) | SAMEA3472056_01117 | Not Available | Negative | 1179182 - 1180096 | 32562.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMEA3472056_01118 | Not Available | Negative | 1180162 - 1181112 | 34776.6 |
| fkbb-type 16 kd peptidyl-prolyl cis-trans isomerase | SAMEA3472056_01119 | Not Available | Negative | 1181114 - 1181563 | 16081.9 |
| lipoprotein signal peptidase | SAMEA3472056_01120 | Not Available | Negative | 1181651 - 1182145 | 18129.3 |
| isoleucyl-trna synthetase | SAMEA3472056_01121 | Not Available | Negative | 1182145 - 1184961 | 104272.0 |
| riboflavin biosynthesis protein | SAMEA3472056_01122 | Not Available | Negative | 1185004 - 1185945 | 34736.4 |
| 30s ribosomal protein s20 | SAMEA3472056_01123 | Not Available | Positive | 1186274 - 1186537 | 9684.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





