Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit of oxidoreductase | SAMEA3472056_01104 | Not Available | Negative | 1163227 - 1164168 | 33545.1 |
| electron transfer flavoprotein fixa | SAMEA3472056_01105 | Not Available | Negative | 1164183 - 1164953 | 27159.3 |
| l-carnitine/gamma-butyrobetaine antiporter | SAMEA3472056_01106 | Not Available | Positive | 1165426 - 1166940 | 56608.4 |
| crotonobetainyl-coa dehydrogenase | SAMEA3472056_01107 | Not Available | Positive | 1166971 - 1168113 | 42560.8 |
| crotonobetainyl-coa:carnitine coa-transferase | SAMEA3472056_01108 | Not Available | Positive | 1168242 - 1169459 | 45071.2 |
| crotonobetaine/carnitine-coa ligase | SAMEA3472056_01109 | Not Available | Positive | 1169533 - 1171086 | 58617.4 |
| carnitinyl-coa dehydratase | SAMEA3472056_01110 | Not Available | Positive | 1171195 - 1171980 | 28191.8 |
| carnitine operon protein caie | SAMEA3472056_01111 | Not Available | Positive | 1171986 - 1172576 | 21201.6 |
| transcriptional activator | SAMEA3472056_01112 | Not Available | Negative | 1172695 - 1173090 | 15423.0 |
| uncharacterised protein | SAMEA3472056_01113 | Not Available | Positive | 1173125 - 1173343 | 8212.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





