Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator protein | SAMEA3472056_01030 | Not Available | Negative | 1081698 - 1082462 | 29427.2 |
| aromatic amino acid transport protein | SAMEA3472056_01031 | Not Available | Positive | 1083006 - 1084376 | 49547.9 |
| inner membrane symporter yicj | SAMEA3472056_01032 | Not Available | Positive | 1084535 - 1085941 | 52612.3 |
| putative alpha-n-arabinofuranosidase ii | SAMEA3472056_01033 | Not Available | Positive | 1085941 - 1086891 | 36608.9 |
| ampe protein | SAMEA3472056_01034 | Not Available | Negative | 1086921 - 1087775 | 32148.9 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3472056_01035 | Not Available | Negative | 1087772 - 1088323 | 20578.2 |
| quinolinate phosphoribosyltransferase | SAMEA3472056_01036 | Not Available | Positive | 1088411 - 1089304 | 32774.0 |
| prepilin peptidase dependent protein d precursor | SAMEA3472056_01037 | Not Available | Positive | 1089507 - 1089947 | 15592.6 |
| protein transport protein hofb | SAMEA3472056_01038 | Not Available | Positive | 1089957 - 1091342 | 50584.3 |
| protein transport protein hofc | SAMEA3472056_01039 | Not Available | Positive | 1091332 - 1092534 | 44404.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





