Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicopper oxidase | SAMEA3472056_01019 | Not Available | Negative | 1066045 - 1067595 | 56673.6 |
| protein | SAMEA3472056_01020 | Not Available | Positive | 1067800 - 1068108 | 11325.4 |
| spermidine synthase | SAMEA3472056_01021 | Not Available | Positive | 1068214 - 1069080 | 32309.1 |
| s-adenosylmethionine decarboxylase proenzyme | SAMEA3472056_01022 | Not Available | Positive | 1069096 - 1069890 | 30386.3 |
| uncharacterised protein family (upf0231) | SAMEA3472056_01023 | Not Available | Negative | 1069928 - 1070290 | 13942.3 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | SAMEA3472056_01024 | Not Available | Negative | 1070465 - 1073062 | 93489.4 |
| cdk activating kinase (cak)/rna polymerase ii transcription initiation/nucleotide excision repair factor tfiih/tfiik, cyclin h subunit | SAMEA3472056_01025 | Not Available | Positive | 1073417 - 1075264 | 69034.2 |
| dihydrolipoamide dehydrogenase | SAMEA3472056_01026 | Not Available | Negative | 1075335 - 1076759 | 50691.4 |
| dihydrolipoamide acetyltransferase component (e2) of pyruvate dehydrogenase | SAMEA3472056_01027 | Not Available | Negative | 1076967 - 1078859 | 66099.8 |
| pyruvate dehydrogenase e1 component | SAMEA3472056_01028 | Not Available | Negative | 1078874 - 1081537 | 99674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





