Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase | SAMEA3472056_00999 | Not Available | Positive | 1046874 - 1047353 | 17817.5 |
| fimbrial protein | SAMEA3472056_01000 | Not Available | Positive | 1047695 - 1048291 | 20366.2 |
| chaperone protein ecpd | SAMEA3472056_01001 | Not Available | Positive | 1048378 - 1049103 | 26258.4 |
| outer membrane usher protein | SAMEA3472056_01002 | Not Available | Positive | 1049145 - 1051745 | 94769.3 |
| fimbrial protein | SAMEA3472056_01003 | Not Available | Positive | 1051759 - 1052307 | 18872.2 |
| fimbrial protein | SAMEA3472056_01004 | Not Available | Positive | 1052322 - 1052936 | 21473.2 |
| fimbrial protein | SAMEA3472056_01005 | Not Available | Positive | 1052957 - 1053547 | 21204.8 |
| fimbrial protein | SAMEA3472056_01006 | Not Available | Positive | 1053559 - 1054671 | 40496.5 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMEA3472056_01007 | Not Available | Positive | 1054807 - 1055601 | 28195.1 |
| pantoate--beta-alanine ligase | SAMEA3472056_01008 | Not Available | Positive | 1055613 - 1056464 | 31569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





