Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-hydroxamate transporter substrate-binding subunit | SAMEA3472056_00989 | Not Available | Negative | 1033189 - 1034079 | 33060.3 |
| ferrichrome transport atp-binding protein | SAMEA3472056_00990 | Not Available | Negative | 1034079 - 1034876 | 28872.2 |
| ferrichrome outer membrane transporter | SAMEA3472056_00991 | Not Available | Negative | 1034927 - 1037122 | 81274.2 |
| penicillin-binding protein 1b | SAMEA3472056_00992 | Not Available | Negative | 1037342 - 1039876 | 94270.0 |
| atp-dependent helicase hrpb | SAMEA3472056_00993 | Not Available | Negative | 1040072 - 1042501 | 89083.1 |
| 2'-5' rna ligase | SAMEA3472056_00994 | Not Available | Positive | 1042575 - 1043105 | 19981.1 |
| sugar fermentation stimulation protein | SAMEA3472056_00995 | Not Available | Positive | 1043120 - 1043824 | 26230.2 |
| rna polymerase-binding transcription factor | SAMEA3472056_00996 | Not Available | Positive | 1044002 - 1044457 | 17528.7 |
| glutamyl-q trna(asp) synthetase | SAMEA3472056_00997 | Not Available | Positive | 1044494 - 1045420 | 34865.5 |
| poly(a) polymerase | SAMEA3472056_00998 | Not Available | Positive | 1045513 - 1046877 | 52551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





